Stem-loop ssa-mir-133a-3

Accession

MI0026483

Description

Salmo salar ssa-mir-133a-3 precursor miRNA

Sequence

3578654 reads, 10245.0 reads per million, 87 experiments

AGCUGGUAAAAAGGAACCAAAucaccucuugaauggauUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  A  A        accuc 
  AGCUGGU  AA GG ACCAAAuc     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUuag     u
UG       AC  C  C        guaag 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-133a-3-5p

• Accession: MIMAT0032341
• Description: Salmo salar ssa-miR-133a-3-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAAGGAACCAAA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-133a-3p

• Accession: MIMAT0032338
• Description: Salmo salar ssa-miR-133a-3p mature miRNA
• Sequence: 39 - UUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482