Stem-loop ssa-mir-135c-1

Accession

MI0026489

Description

Salmo salar ssa-mir-135c-1 precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUACGUGAggauagauguguucAUGUAGGGAUAGAAGCCACU
..((((((((.(((((((((((((.((....)).)))))))))))))))))))))..

Structure

UA        U             g  a 
  UGGCUUUU AUUCCUACGUGAg au g
  |||||||| ||||||||||||| ||  
  ACCGAAGA UAGGGAUGUAcuu ug a
UC        -             g  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-135c-5p

• Accession: MIMAT0032348
• Description: Salmo salar ssa-miR-135c-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUACGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-135c-3p

• Accession: MIMAT0032349
• Description: Salmo salar ssa-miR-135c-3p mature miRNA
• Sequence: 38 - AUGUAGGGAUAGAAGCCACU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482