Stem-loop ssa-mir-137-1

Accession

MI0026491

Description

Salmo salar ssa-mir-137-1 precursor miRNA

Literature search

1 open access papers mention ssa-mir-137-1
(6 sentences)

Sequence

ACGGGUAUUCUUGGGUUGAUAAuacagaugucgaugUUAUUGCUUGAGAAUACGCGUAG
(((.((((((((((((.(((((((..(....)..))))))))))))))))))).)))..

Structure

--   G            U       ca a 
  ACG GUAUUCUUGGGU GAUAAua  g u
  ||| |||||||||||| |||||||  |  
  UGC CAUAAGAGUUCG UUAUUgu  c g
GA   G            -       ag u 

Annotation confidence Low

Genome context

Unknown

Mature ssa-miR-137-5p

• Accession: MIMAT0032350
• Description: Salmo salar ssa-miR-137-5p mature miRNA
• Sequence: 1 - ACGGGUAUUCUUGGGUUGAUAA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-137-3p

• Accession: MIMAT0032351
• Description: Salmo salar ssa-miR-137-3p mature miRNA
• Sequence: 37 - UUAUUGCUUGAGAAUACGCGUAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482