Stem-loop ssa-mir-139-1

Accession

MI0026497

Description

Salmo salar ssa-mir-139-1 precursor miRNA

Literature search

1 open access papers mention ssa-mir-139-1
(3 sentences)

Sequence

UCUACAGUGCAUGUGUCUCCAGUguuugugugcuacUGGAGAUAUGGCUCUGUUGGAAU
(((((((.((..(((((((((((((......)).))))))))))).)).))).))))..

Structure

--    -   U  AU           -  uu 
  UCUA CAG GC  GUGUCUCCAGU gu  g
  |||| ||| ||  ||||||||||| ||   
  AGGU GUC CG  UAUAGAGGUca cg  u
UA    U   U  -G           u  ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-139-5p

• Accession: MIMAT0032356
• Description: Salmo salar ssa-miR-139-5p mature miRNA
• Sequence: 1 - UCUACAGUGCAUGUGUCUCCAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-139-3p

• Accession: MIMAT0032357
• Description: Salmo salar ssa-miR-139-3p mature miRNA
• Sequence: 37 - UGGAGAUAUGGCUCUGUUGGAAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482