Stem-loop ssa-mir-139-2

Accession

MI0026498

Description

Salmo salar ssa-mir-139-2 precursor miRNA

Literature search

1 open access papers mention ssa-mir-139-2
(3 sentences)

Sequence

UCUACAGUGCAUGUGUCUCCAGUgaauaugagcuacUGGAGAGGCAGUUCUGUGUGAGU
(((((((.((.(((.(((((((((.........))))))))).))))).))))).))..

Structure

--  -     U  A   G         aau 
  UC UACAG GC UGU UCUCCAGUg   a
  || ||||| || ||| |||||||||   u
  AG GUGUC UG ACG AGAGGUcau   g
UG  U     U  -   G         cga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-139-5p

• Accession: MIMAT0032356
• Description: Salmo salar ssa-miR-139-5p mature miRNA
• Sequence: 1 - UCUACAGUGCAUGUGUCUCCAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-139-2-3p

• Accession: MIMAT0032358
• Description: Salmo salar ssa-miR-139-2-3p mature miRNA
• Sequence: 37 - UGGAGAGGCAGUUCUGUGUGAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482