Stem-loop ssa-mir-143

Accession

MI0026503

Description

Salmo salar ssa-mir-143 precursor miRNA

Sequence

GGUGCAGUGCUGCAUCUCUGGUcaauugggagucUGAGAUGAAGCACUGUAGCUC
(.(((((((((.((((((.((((......)).)).)))))).))))))))).)..

Structure

-- G         G      U  -  aa 
  G UGCAGUGCU CAUCUC GG Uc  u
  | ||||||||| |||||| || ||   
  C AUGUCACGA GUAGAG cu ag  u
CU G         A      U  g  gg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-143-5p

• Accession: MIMAT0032365
• Description: Salmo salar ssa-miR-143-5p mature miRNA
• Sequence: 1 - GGUGCAGUGCUGCAUCUCUGGU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-143-3p

• Accession: MIMAT0032366
• Description: Salmo salar ssa-miR-143-3p mature miRNA
• Sequence: 35 - UGAGAUGAAGCACUGUAGCUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482