Stem-loop ssa-mir-148a

Accession

MI0026513

Description

Salmo salar ssa-mir-148a precursor miRNA

Literature search

1 open access papers mention ssa-mir-148a
(5 sentences)

Sequence

AAGUUCUGUGAUACACUUCGACUcuaauuguuugcagUCAGUGCAUUACAGAACUUUGU
((((((((((((.((((..((((.(((....))).)))))))).))))))))))))...

Structure

---            A    UC    c   u 
   AAGUUCUGUGAU CACU  GACU uaa u
   |||||||||||| ||||  |||| |||  
   UUCAAGACAUUA GUGA  CUga guu g
UGU            C    --    c   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-148a-5p

• Accession: MIMAT0032379
• Description: Salmo salar ssa-miR-148a-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-148a-3p

• Accession: MIMAT0032380
• Description: Salmo salar ssa-miR-148a-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482