Stem-loop ssa-mir-148b

Accession

MI0026514

Description

Salmo salar ssa-mir-148b precursor miRNA

Literature search

1 open access papers mention ssa-mir-148b
(1 sentences)

Sequence

AAGUUCGGUGAUACACUUCGACUcuaauuguuugcagUCAGUGCAUUACAGAACUUUAU
((((((.(((((.((((..((((.(((....))).)))))))).))))).))))))...

Structure

---      G     A    UC    c   u 
   AAGUUC GUGAU CACU  GACU uaa u
   |||||| ||||| ||||  |||| |||  
   UUCAAG CAUUA GUGA  CUga guu g
UAU      A     C    --    c   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-148b-5p

• Accession: MIMAT0032381
• Description: Salmo salar ssa-miR-148b-5p mature miRNA
• Sequence: 1 - AAGUUCGGUGAUACACUUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-148b-3p

• Accession: MIMAT0032382
• Description: Salmo salar ssa-miR-148b-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482