Stem-loop ssa-mir-150

Accession

MI0026515

Description

Salmo salar ssa-mir-150 precursor miRNA

Sequence

1116691 reads, 26971.0 reads per million, 87 experiments

UCUCCCAAUCCUUGUACCAGUGUCugauuuuaagcugaCGCUGGGCAUGGUUUGGGGGGGGc
((((((((.((.(((.((((((((............))))))))))).)).))))))))...

Structure

---        U  U   A        ugauu 
   UCUCCCAA CC UGU CCAGUGUC     u
   |||||||| || ||| ||||||||      
   GGGGGGUU GG ACG GGUCGCag     u
cGG        U  U   -        ucgaa 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-150-5p

• Accession: MIMAT0032383
• Description: Salmo salar ssa-miR-150-5p mature miRNA
• Sequence: 1 - UCUCCCAAUCCUUGUACCAGUGUC - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-150-3p

• Accession: MIMAT0032384
• Description: Salmo salar ssa-miR-150-3p mature miRNA
• Sequence: 39 - CGCUGGGCAUGGUUUGGGGGGGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482