Stem-loop ssa-mir-153a-1

Accession

MI0026517

Description

Salmo salar ssa-mir-153a-1 precursor miRNA

Sequence

GGCAUUUUUGUGAUUUGCAGCUaguagucuggguccagUUGCAUAGUCACAAAAAUGAUC
..((((((((((((((((((((.(..........).))))))).)))))))))))))...

Structure

-GG             -       a uagu 
   CAUUUUUGUGAUU UGCAGCU g    c
   ||||||||||||| ||||||| |     
   GUAAAAACACUGA ACGUUga c    u
CUA             U       c uggg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-153a-5p

• Accession: MIMAT0032387
• Description: Salmo salar ssa-miR-153a-5p mature miRNA
• Sequence: 1 - GGCAUUUUUGUGAUUUGCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-153a-3p

• Accession: MIMAT0032388
• Description: Salmo salar ssa-miR-153a-3p mature miRNA
• Sequence: 39 - UUGCAUAGUCACAAAAAUGAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482