Stem-loop ssa-mir-15b

Accession

MI0026523

Description

Salmo salar ssa-mir-15b precursor miRNA

Literature search

0 open access papers mention ssa-mir-15b
(0 sentences)

Sequence

UAGCAGCACAUCAUGUUUUGCagguaucuaaaagcaacucCAAAUCAUUAUGUGCUGCCGCU
..(((((((((.(((.((((.((..............)).)))).))).)))))))))....

Structure

--UA         C   U    C  guaucu 
    GCAGCACAU AUG UUUG ag      a
    ||||||||| ||| |||| ||       
    CGUCGUGUA UAC AAAC uc      a
UCGC         U   U    c  aacgaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-15b-5p

• Accession: MIMAT0032396
• Description: Salmo salar ssa-miR-15b-5p mature miRNA
• Sequence: 1 - UAGCAGCACAUCAUGUUUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-15b-3p

• Accession: MIMAT0032397
• Description: Salmo salar ssa-miR-15b-3p mature miRNA
• Sequence: 41 - CAAAUCAUUAUGUGCUGCCGCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482