Stem-loop ssa-mir-181a-2

Accession

MI0026537

Description

Salmo salar ssa-mir-181a-2 precursor miRNA

Literature search

4 open access papers mention ssa-mir-181a-2
(15 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGUuugagccucugacagaaACCAUCGACCGUUGACUGUACC
.(((.((((((..(((((((.((((.............))))))))))))))))).)))...

Structure

--A   U      CU       A    gagcc 
   ACA UCAACG  GUCGGUG GUuu     u
   ||| ||||||  ||||||| ||||     c
   UGU AGUUGC  CAGCUAC CAaa     u
CCA   C      --       -    gacag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-181a-5p

• Accession: MIMAT0032417
• Description: Salmo salar ssa-miR-181a-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-181a-2-3p

• Accession: MIMAT0032419
• Description: Salmo salar ssa-miR-181a-2-3p mature miRNA
• Sequence: 41 - ACCAUCGACCGUUGACUGUACC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482