Stem-loop ssa-mir-190a

Accession

MI0026549

Description

Salmo salar ssa-mir-190a precursor miRNA

Literature search

1 open access papers mention ssa-mir-190a
(6 sentences)

Sequence

UGAUAUGUUUGAUAUAUUAGGUUGuuauucaguccaACUAUAUAUCAAACAUAUUCCU
.((((((((((((((((..(((((..........)))))))))))))))))))))...

Structure

--U                UA     uuau 
   GAUAUGUUUGAUAUAU  GGUUG    u
   ||||||||||||||||  |||||     
   UUAUACAAACUAUAUA  UCAac    c
UCC                --     cuga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-190a-5p

• Accession: MIMAT0032436
• Description: Salmo salar ssa-miR-190a-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGAUAUAUUAGGUUG - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-190a-3p

• Accession: MIMAT0032437
• Description: Salmo salar ssa-miR-190a-3p mature miRNA
• Sequence: 37 - ACUAUAUAUCAAACAUAUUCCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482