Stem-loop ssa-mir-192b

Accession

MI0026553

Description

Salmo salar ssa-mir-192b precursor miRNA

Literature search

1 open access papers mention ssa-mir-192b
(1 sentences)

Sequence

CCUGUCAGUUCUGUAGGCCACUgcugugucuauccuacugagcacacacagGGGUUUAUAUGGAGCAAAGGAACUC
(((....((((((((((((.(((.(((((((.........)).)))))))).)))))))..)))))..))).....

Structure

-----   GUCA     --       A   c     -  auc 
     CCU    GUUCU  GUAGGCC CUg ugugu cu   c
     |||    |||||  ||||||| ||| ||||| ||   u
     GGA    CGAGG  UAUUUGG gac acaca ga   a
CUCAA   --AA     UA       G   -     c  guc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-192b-5p

• Accession: MIMAT0032443
• Description: Salmo salar ssa-miR-192b-5p mature miRNA
• Sequence: 1 - CCUGUCAGUUCUGUAGGCCACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-192b-3p

• Accession: MIMAT0032444
• Description: Salmo salar ssa-miR-192b-3p mature miRNA
• Sequence: 52 - GGGUUUAUAUGGAGCAAAGGAACUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482