Stem-loop ssa-mir-194a-1

Accession

MI0026555

Description

Salmo salar ssa-mir-194a-1 precursor miRNA

Sequence

UGUAACAGCAACUCCAUGUGGAaguugccuguguuCCAGUGGAGAUGCUGUUACCUGC
.(((((((((.((((((.(((((..........))))))))))).)))))))))....

Structure

---U         A      G     guug 
    GUAACAGCA CUCCAU UGGAa    c
    ||||||||| |||||| |||||     
    CAUUGUCGU GAGGUG ACCuu    c
CGUC         A      -     gugu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-194a-5p

• Accession: MIMAT0032447
• Description: Salmo salar ssa-miR-194a-5p mature miRNA
• Sequence: 1 - UGUAACAGCAACUCCAUGUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-194a-3p

• Accession: MIMAT0032448
• Description: Salmo salar ssa-miR-194a-3p mature miRNA
• Sequence: 36 - CCAGUGGAGAUGCUGUUACCUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482