Stem-loop ssa-mir-196b-1

Accession

MI0026563

Description

Salmo salar ssa-mir-196b-1 precursor miRNA

Sequence

UAGGUAGUUUCAAGUUGUUGGGcuggacgcguaucaCAGGAACCUGAAACUACCUGAA
((((((((((((.(((.(((................))).))).))))))))))))..

Structure

--            A   G   GGcugga 
  UAGGUAGUUUCA GUU UUG       c
  |||||||||||| ||| |||        
  GUCCAUCAAAGU CAA GAC       g
AA            C   G   acuaugc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-196b-5p

• Accession: MIMAT0032458
• Description: Salmo salar ssa-miR-196b-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAAGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-196b-3p

• Accession: MIMAT0032459
• Description: Salmo salar ssa-miR-196b-3p mature miRNA
• Sequence: 37 - CAGGAACCUGAAACUACCUGAA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482