Stem-loop ssa-mir-19a-1

Accession

MI0026569

Description

Salmo salar ssa-mir-19a-1 precursor miRNA

Sequence

437384 reads, 2894.0 reads per million, 87 experiments

AGUUUUGCAUAGUUGCACUAcaagagaaauggaguUGUGCAAAUCUAUGCAAAACUGA
((((((((((((((((((.((............)).))))))..))))))))))))..

Structure

--            --      U  aagag 
  AGUUUUGCAUAG  UUGCAC Ac     a
  ||||||||||||  |||||| ||      
  UCAAAACGUAUC  AACGUG ug     a
AG            UA      U  aggua 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-19a-5p

• Accession: MIMAT0032462
• Description: Salmo salar ssa-miR-19a-5p mature miRNA
• Sequence: 1 - AGUUUUGCAUAGUUGCACUA - 20
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-19a-3p

• Accession: MIMAT0032463
• Description: Salmo salar ssa-miR-19a-3p mature miRNA
• Sequence: 36 - UGUGCAAAUCUAUGCAAAACUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482