Stem-loop ssa-mir-19d

Accession

MI0026576

Description

Salmo salar ssa-mir-19d precursor miRNA

Sequence

AGCUUUGCGGGGUGGGCAGUCAGCcuuuuuguaggagcagcUGUGCAAACCCAAGCAAAACUG
((.(((((.(((((.(((((...(((......)))....))))).)..))))..))))).)).

Structure

-  C     -G    -- G     -CAG   uu 
 AG UUUGC  GGGU  G GCAGU    Ccu  u
 || |||||  ||||  | |||||    |||   
 UC AAACG  CCCA  C UGUcg    gga  u
G  A     AA    AA G     acga   ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-19d-5p

• Accession: MIMAT0032469
• Description: Salmo salar ssa-miR-19d-5p mature miRNA
• Sequence: 1 - AGCUUUGCGGGGUGGGCAGUCAGC - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-19d-3p

• Accession: MIMAT0032470
• Description: Salmo salar ssa-miR-19d-3p mature miRNA
• Sequence: 42 - UGUGCAAACCCAAGCAAAACUG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482