Stem-loop ssa-mir-1-3

Accession

MI0026577

Description

Salmo salar ssa-mir-1-3 precursor miRNA

Sequence

ACAUACUUCUUUAUGCGUCCAUAugaacaagaggaacuaUGGAAUGUAAAGAAGUAUGUAU
(((((((((((((((..((((((....(....)....)))))).)))))))))))))))..

Structure

--               CG      ugaa a 
  ACAUACUUCUUUAUG  UCCAUA    c a
  |||||||||||||||  ||||||    |  
  UGUAUGAAGAAAUGU  AGGUau    g g
UA               -A      caag a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-1-3-5p

• Accession: MIMAT0032471
• Description: Salmo salar ssa-miR-1-3-5p mature miRNA
• Sequence: 1 - ACAUACUUCUUUAUGCGUCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-1-3p

• Accession: MIMAT0032472
• Description: Salmo salar ssa-miR-1-3p mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482