Stem-loop ssa-mir-202

Accession

MI0026586

Description

Salmo salar ssa-mir-202 precursor miRNA

Literature search

1 open access papers mention ssa-mir-202
(11 sentences)

Sequence

UUCCUAUGCAUAUACCGCUUUGAgaucuagcuuuAAAGAGGCAUAGGGCAUGGGAA
.((((((((.(((.((.(((((((.......))))))).)).)))..)))))))).

Structure

U        -A   A  G       au 
 UCCUAUGC  UAU CC CUUUGAg  c
 ||||||||  ||| || |||||||  u
 AGGGUACG  AUA GG GAAAuuu  a
A        GG   C  A       cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-202-3p

• Accession: MIMAT0032481
• Description: Salmo salar ssa-miR-202-3p mature miRNA
• Sequence: 1 - UUCCUAUGCAUAUACCGCUUUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-202-5p

• Accession: MIMAT0032482
• Description: Salmo salar ssa-miR-202-5p mature miRNA
• Sequence: 35 - AAAGAGGCAUAGGGCAUGGGAA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482