Stem-loop ssa-mir-204-1

Accession

MI0026590

Description

Salmo salar ssa-mir-204-1 precursor miRNA

Sequence

UUCCCUUUGUCAUCCUAUGCCUggagaucaugauaagGCAGGGACAGCAAAGGGAUGC
.(((((((((..((((.(((((.............)))))))))..)))))))))...

Structure

--U         CA    A     ggaga 
   UCCCUUUGU  UCCU UGCCU     u
   |||||||||  |||| |||||     c
   AGGGAAACG  AGGG ACGga     a
CGU         AC    -     auagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-204-5p

• Accession: MIMAT0032488
• Description: Salmo salar ssa-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-204-3p

• Accession: MIMAT0032489
• Description: Salmo salar ssa-miR-204-3p mature miRNA
• Sequence: 38 - GCAGGGACAGCAAAGGGAUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482