Stem-loop ssa-mir-204-3

Accession

MI0026592

Description

Salmo salar ssa-mir-204-3 precursor miRNA

Sequence

266170 reads, 746.0 reads per million, 87 experiments

UUCCCUUUGUCAUCCUAUGCCUgggcucauauaaaaggGGCUGGGGAGGCAAAGGGACGC
.((((((((((.(((((.((((...............))))))))).))))))))))...

Structure

--U          A     U    gggcuc 
   UCCCUUUGUC UCCUA GCCU      a
   |||||||||| ||||| ||||      u
   AGGGAAACGG GGGGU CGGg      a
CGC          A     -    gaaaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-204-5p

• Accession: MIMAT0032488
• Description: Salmo salar ssa-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-204-3-3p

• Accession: MIMAT0032490
• Description: Salmo salar ssa-miR-204-3-3p mature miRNA
• Sequence: 39 - GGCUGGGGAGGCAAAGGGACGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482