Stem-loop ssa-mir-205b-1

Accession

MI0026596

Description

Salmo salar ssa-mir-205b-1 precursor miRNA

Literature search

0 open access papers mention ssa-mir-205b-1
(0 sentences)

Sequence

UCCUUCAUUCCACCGGAGUCUGugucaugaaccaaucaGAUUUCAGUGGUAUGAAGAGU
..((((((.((((.((((((((..............)))))))).)))).))))))...

Structure

-UC      U    C        ugucau 
   CUUCAU CCAC GGAGUCUG      g
   |||||| |||| ||||||||       
   GAAGUA GGUG CUUUAGac      a
UGA      U    A        uaacca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-205b-5p

• Accession: MIMAT0032495
• Description: Salmo salar ssa-miR-205b-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAGUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-205b-1-3p

• Accession: MIMAT0032496
• Description: Salmo salar ssa-miR-205b-1-3p mature miRNA
• Sequence: 39 - GAUUUCAGUGGUAUGAAGAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482