Stem-loop ssa-mir-205b-3

Accession

MI0026598

Description

Salmo salar ssa-mir-205b-3 precursor miRNA

Literature search

0 open access papers mention ssa-mir-205b-3
(0 sentences)

Sequence

UCCUUCAUUCCACCGGAGUCUGugccuuuauccaaacaGAUUUCAGUGAAGUGAAGUGUA
..(((((((.(((.(((((((((............))))))))).))).)))))))....

Structure

--UC       C   C         gccuu 
    CUUCAUU CAC GGAGUCUGu     u
    ||||||| ||| |||||||||      
    GAAGUGA GUG CUUUAGaca     a
AUGU       A   A         aaccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-205b-5p

• Accession: MIMAT0032495
• Description: Salmo salar ssa-miR-205b-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAGUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-205b-3-3p

• Accession: MIMAT0032498
• Description: Salmo salar ssa-miR-205b-3-3p mature miRNA
• Sequence: 39 - GAUUUCAGUGAAGUGAAGUGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482