Stem-loop ssa-mir-206

Accession

MI0026600

Description

Salmo salar ssa-mir-206 precursor miRNA

Literature search

1 open access papers mention ssa-mir-206
(1 sentences)

Sequence

6937127 reads, 19131.0 reads per million, 87 experiments

ACAUGCUUCCUUAUAUCCCCAUAugaauacugcuguuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure

--                CC     ugaau 
  ACAUGCUUCCUUAUAU  CCAUA     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     u
GG                -A     ugucg 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-206-5p

• Accession: MIMAT0032500
• Description: Salmo salar ssa-miR-206-5p mature miRNA
• Sequence: 1 - ACAUGCUUCCUUAUAUCCCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-206-3p

• Accession: MIMAT0032501
• Description: Salmo salar ssa-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482