Stem-loop ssa-mir-210-2

Accession

MI0026606

Description

Salmo salar ssa-mir-210-2 precursor miRNA

Literature search

1 open access papers mention ssa-mir-210-2
(4 sentences)

Sequence

AGCCACUGACUAACGUACAUUGcgccuaucccaauuccaCUGUGCGUGUGACAGCGGCU
((((.(((.(..(((((((.((...............)).)))))))..).))).))))

Structure

    A   A UA       U  cgccua 
AGCC CUG C  ACGUACA UG      u
|||| ||| |  ||||||| ||      c
UCGG GAC G  UGCGUGU ac      c
    C   A UG       C  cuuaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-210-5p

• Accession: MIMAT0032508
• Description: Salmo salar ssa-miR-210-5p mature miRNA
• Sequence: 1 - AGCCACUGACUAACGUACAUUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-210-3p

• Accession: MIMAT0032509
• Description: Salmo salar ssa-miR-210-3p mature miRNA
• Sequence: 40 - CUGUGCGUGUGACAGCGGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482