Stem-loop ssa-mir-214-3

Accession

MI0026613

Description

Salmo salar ssa-mir-214-3 precursor miRNA

Literature search

1 open access papers mention ssa-mir-214-3
(3 sentences)

Sequence

UGCCUGUCUACACUUGCUGUGCagaacuuccuggaaccugUACAGCAGGCACAGACAGGCAGA
(((((((((...((((((((((((...(((...))).))))))))))))...)))))))))..

Structure

--         ACA            aac   c 
  UGCCUGUCU   CUUGCUGUGCag   uuc  
  |||||||||   ||||||||||||   ||| u
  ACGGACAGA   GGACGACAUguc   aag  
AG         CAC            --c   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-214-5p

• Accession: MIMAT0032514
• Description: Salmo salar ssa-miR-214-5p mature miRNA
• Sequence: 1 - UGCCUGUCUACACUUGCUGUGC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-214-3p

• Accession: MIMAT0032515
• Description: Salmo salar ssa-miR-214-3p mature miRNA
• Sequence: 41 - UACAGCAGGCACAGACAGGCAGA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482