Stem-loop ssa-mir-219a-1

Accession

MI0026620

Description

Salmo salar ssa-mir-219a-1 precursor miRNA

Sequence

UGAUUGUCCAAACGCAAUUCUUGagcaaaaucaaacaaaaccccaAGAAUUGUGCAUGGACAUCUGU
.(((.(((((..(((((((((((....................)))))))))))..))))))))...

Structure

--U   U     AA           agcaaaauc 
   GAU GUCCA  CGCAAUUCUUG         a
   ||| |||||  |||||||||||          
   CUA CAGGU  GUGUUAAGAac         a
UGU   -     AC           cccaaaaca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-219a-5p

• Accession: MIMAT0032526
• Description: Salmo salar ssa-miR-219a-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-219a-3p

• Accession: MIMAT0032527
• Description: Salmo salar ssa-miR-219a-3p mature miRNA
• Sequence: 46 - AGAAUUGUGCAUGGACAUCUGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482