Stem-loop ssa-mir-219b-1

Accession

MI0026622

Description

Salmo salar ssa-mir-219b-1 precursor miRNA

Sequence

UGAUUGUCCAAACGCAAUUCUUGugaaauuuuaaacuacccgAGAAUUGUAUCUGGACAUCUGU
.(((.(((((...((((((((((.(..............)))))))))))...))))))))...

Structure

--U   U     AAC          u aaauuu 
   GAU GUCCA   GCAAUUCUUG g      u
   ||| |||||   |||||||||| |       
   CUA CAGGU   UGUUAAGAgc c      a
UGU   -     CUA          - caucaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-219b-5p

• Accession: MIMAT0032528
• Description: Salmo salar ssa-miR-219b-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-219b-3p

• Accession: MIMAT0032529
• Description: Salmo salar ssa-miR-219b-3p mature miRNA
• Sequence: 43 - AGAAUUGUAUCUGGACAUCUGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482