Stem-loop ssa-mir-23a-2

Accession

MI0026639

Description

Salmo salar ssa-mir-23a-2 precursor miRNA

Literature search

2 open access papers mention ssa-mir-23a-2
(4 sentences)

Sequence

GGAUUCCUGGCAGAGUGAUUUGguauugugucauaaaAUCACAUUGCCAGGGAUUUCC
.((((((((((((.(((((((..............))))))).))))))))))))...

Structure

--G            A       Gguauu 
   GAUUCCUGGCAG GUGAUUU      g
   |||||||||||| |||||||       
   UUAGGGACCGUU CACUAaa      u
CCU            A       auacug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-23a-3p

• Accession: MIMAT0032549
• Description: Salmo salar ssa-miR-23a-3p mature miRNA
• Sequence: 38 - AUCACAUUGCCAGGGAUUUCC - 58
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-23a-5p

• Accession: MIMAT0032551
• Description: Salmo salar ssa-miR-23a-5p mature miRNA
• Sequence: 1 - GGAUUCCUGGCAGAGUGAUUUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482