Stem-loop ssa-mir-26a-6

Accession

MI0026654

Description

Salmo salar ssa-mir-26a-6 precursor miRNA

Literature search

2 open access papers mention ssa-mir-26a-6
(6 sentences)

Sequence

UUCAAGUAAUCCAGGAUAGGCUguguguauccugguuggCCUAUUCAUGAUUACUUGUACU
..(((((((((..((((((((((.............))))))))))..)))))))))....

Structure

--UU         CA          ugugu 
    CAAGUAAUC  GGAUAGGCUg     a
    |||||||||  ||||||||||     u
    GUUCAUUAG  CUUAUCCggu     c
UCAU         UA          ugguc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-26a-5p

• Accession: MIMAT0032563
• Description: Salmo salar ssa-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-26a-6-3p

• Accession: MIMAT0032568
• Description: Salmo salar ssa-miR-26a-6-3p mature miRNA
• Sequence: 40 - CCUAUUCAUGAUUACUUGUACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482