Stem-loop ssa-mir-26d

Accession

MI0026656

Description

Salmo salar ssa-mir-26d precursor miRNA

Literature search

2 open access papers mention ssa-mir-26d
(5 sentences)

Sequence

UUCAAGUAAUCUAGGAUAGGCUuguuuaagcagggagagCCUAUUCGGGAUGACUUGGUUC
.((((((.((((.((((((((((.............)))))))))).)))).))))))...

Structure

--U      A    A          guuua 
   UCAAGU AUCU GGAUAGGCUu     a
   |||||| |||| ||||||||||     g
   GGUUCA UAGG CUUAUCCgag     c
CUU      G    G          aggga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-26d-5p

• Accession: MIMAT0032571
• Description: Salmo salar ssa-miR-26d-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCUAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-26d-3p

• Accession: MIMAT0032572
• Description: Salmo salar ssa-miR-26d-3p mature miRNA
• Sequence: 40 - CCUAUUCGGGAUGACUUGGUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482