Stem-loop ssa-mir-27b-1

Accession

MI0026659

Description

Salmo salar ssa-mir-27b-1 precursor miRNA

Sequence

AGAGCUUAGCUGAUUGGUGAACagugauugaucuccucuuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((.((.........)).))))))))))))))))))))))..

Structure

--           G    G       u  uug 
  AGAGCUUAGCU AUUG UGAACag ga   a
  ||||||||||| |||| ||||||| ||   u
  UCUUGAAUCGG UGAC ACUUguu cu   c
CG           -    -       u  ccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-27b-5p

• Accession: MIMAT0032576
• Description: Salmo salar ssa-miR-27b-5p mature miRNA
• Sequence: 1 - AGAGCUUAGCUGAUUGGUGAAC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-27b-3p

• Accession: MIMAT0032577
• Description: Salmo salar ssa-miR-27b-3p mature miRNA
• Sequence: 43 - UUCACAGUGGCUAAGUUCUGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482