Stem-loop ssa-mir-29a

Accession

MI0026664

Description

Salmo salar ssa-mir-29a precursor miRNA

Sequence

CUGGUUUCACAUGGUGGUUUAGAuuaauguucccagugucUAGCACCAUUUGAAAUCAGU
(((((((((.((((((..((((((...((....))..)))))))))))).))))))))).

Structure

-         C      GU      uaa  u 
 CUGGUUUCA AUGGUG  UUAGAu   ug u
 ||||||||| ||||||  ||||||   ||  
 GACUAAAGU UACCAC  GAUcug   ac c
U         U      --      -ug  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-29a-5p

• Accession: MIMAT0032583
• Description: Salmo salar ssa-miR-29a-5p mature miRNA
• Sequence: 1 - CUGGUUUCACAUGGUGGUUUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-29a-3p

• Accession: MIMAT0032584
• Description: Salmo salar ssa-miR-29a-3p mature miRNA
• Sequence: 41 - UAGCACCAUUUGAAAUCAGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482