miRBase entry: ssa-mir-29b-2

Stem-loop ssa-mir-29b-2


Accession
MI0026666
Description
Salmo salar ssa-mir-29b-2 precursor miRNA


Sequence

UGACUGAUUUCCUCUGGUGUUUAGAgccccuuacagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((((...(((((((.(((((........))..))))))))))...)))))))))))

Structure
           CUC       U   --  ccc 
UGACUGAUUUC   UGGUGUU AGA  gc   u
|||||||||||   ||||||| |||  ||    
AUUGGCUAAAG   ACCACGA Ucu  cg   u
           UUU       -   uc  aca 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-29b-3p

Accession MIMAT0032586
Description Salmo salar ssa-miR-29b-3p mature miRNA
Sequence 42 - UAGCACCAUUUGAAAUCGGUUA - 63
Evidence experimental
Illumina [1]

Mature ssa-miR-29b-2-5p

Accession MIMAT0032587
Description Salmo salar ssa-miR-29b-2-5p mature miRNA
Sequence 1 - UGACUGAUUUCCUCUGGUGUUUAGA - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482