Stem-loop ssa-mir-29b-2

Accession

MI0026666

Description

Salmo salar ssa-mir-29b-2 precursor miRNA

Sequence

UGACUGAUUUCCUCUGGUGUUUAGAgccccuuacagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((((...(((((((.(((((........))..))))))))))...)))))))))))

Structure

           CUC       U   --  ccc 
UGACUGAUUUC   UGGUGUU AGA  gc   u
|||||||||||   ||||||| |||  ||    
AUUGGCUAAAG   ACCACGA Ucu  cg   u
           UUU       -   uc  aca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-29b-3p

• Accession: MIMAT0032586
• Description: Salmo salar ssa-miR-29b-3p mature miRNA
• Sequence: 42 - UAGCACCAUUUGAAAUCGGUUA - 63
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-29b-2-5p

• Accession: MIMAT0032587
• Description: Salmo salar ssa-miR-29b-2-5p mature miRNA
• Sequence: 1 - UGACUGAUUUCCUCUGGUGUUUAGA - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482