Stem-loop ssa-mir-29b-3

Accession

MI0026667

Description

Salmo salar ssa-mir-29b-3 precursor miRNA

Sequence

ACCGAUUUCUUUUGGUGUUCAGAgucuuguuguguuucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.((((.(.......).)))))))))))...)))))))))..

Structure

--         UUU       C    u uu 
  ACCGAUUUC   UGGUGUU AGAg c  g
  |||||||||   ||||||| |||| |  u
  UGGCUAAAG   ACCACGA Ucuu g  u
AU         UUU       -    u ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-29b-3p

• Accession: MIMAT0032586
• Description: Salmo salar ssa-miR-29b-3p mature miRNA
• Sequence: 39 - UAGCACCAUUUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-29b-3-5p

• Accession: MIMAT0032588
• Description: Salmo salar ssa-miR-29b-3-5p mature miRNA
• Sequence: 1 - ACCGAUUUCUUUUGGUGUUCAGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482