Stem-loop ssa-mir-301a-1

Accession

MI0026670

Description

Salmo salar ssa-mir-301a-1 precursor miRNA

Sequence

UUUGACAAUGUUGCACUACUguaccauucauucuagCAGUGCAAUAGUAUUGUCAUAGC
..(((((((((((((((.(((............))).))))))))...)))))))....

Structure

--UU       ---        A   uacca 
    UGACAAU   GUUGCACU CUg     u
    |||||||   |||||||| |||      
    ACUGUUA   UAACGUGA gau     u
CGAU       UGA        C   cuuac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-301a-5p

• Accession: MIMAT0032592
• Description: Salmo salar ssa-miR-301a-5p mature miRNA
• Sequence: 1 - UUUGACAAUGUUGCACUACU - 20
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-301a-3p

• Accession: MIMAT0032593
• Description: Salmo salar ssa-miR-301a-3p mature miRNA
• Sequence: 37 - CAGUGCAAUAGUAUUGUCAUAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482