Stem-loop ssa-mir-30a-3

Accession

MI0026674

Description

Salmo salar ssa-mir-30a-3 precursor miRNA

Literature search

3 open access papers mention ssa-mir-30a-3
(3 sentences)

Sequence

UGUAAACAUCCUACACUCUCAGCugugacaucaucgagCUGGGAGAGGGGUGUUUACACU
((((((((((((...(((((((((.(((.....)))))))))))).))))))))))))..

Structure

--            ACA         g   c 
  UGUAAACAUCCU   CUCUCAGCu uga a
  ||||||||||||   ||||||||| ||| u
  ACAUUUGUGGGG   GAGGGUCga gcu c
UC            --A         -   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-30a-5p

• Accession: MIMAT0032600
• Description: Salmo salar ssa-miR-30a-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-30a-3-3p

• Accession: MIMAT0032601
• Description: Salmo salar ssa-miR-30a-3-3p mature miRNA
• Sequence: 39 - CUGGGAGAGGGGUGUUUACACU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482