Stem-loop ssa-mir-30a-4

Accession

MI0026675

Description

Salmo salar ssa-mir-30a-4 precursor miRNA

Literature search

3 open access papers mention ssa-mir-30a-4
(3 sentences)

Sequence

UGUAAACAUCCUACACUCUCAGCugugacaucaucgagCUGGGAGAGGGGUGUUUACGCU
.(((((((((((...(((((((((.(((.....)))))))))))).)))))))))))...

Structure

--U           ACA         g   c 
   GUAAACAUCCU   CUCUCAGCu uga a
   |||||||||||   ||||||||| ||| u
   CAUUUGUGGGG   GAGGGUCga gcu c
UCG           --A         -   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-30a-5p

• Accession: MIMAT0032600
• Description: Salmo salar ssa-miR-30a-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-30a-4-3p

• Accession: MIMAT0032602
• Description: Salmo salar ssa-miR-30a-4-3p mature miRNA
• Sequence: 39 - CUGGGAGAGGGGUGUUUACGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482