Stem-loop ssa-mir-30e-2

Accession

MI0026684

Description

Salmo salar ssa-mir-30e-2 precursor miRNA

Literature search

3 open access papers mention ssa-mir-30e-2
(3 sentences)

Sequence

UGUAAACAUCCUACACUCAGCUgugaguuggaagcagaggCUGGGAGAAGGCUGUUUACUUU
.(((((((.(((.(.(((((((....(((...)))...))))))).).))).)))))))...

Structure

--U       U   A A       guga   g 
   GUAAACA CCU C CUCAGCU    guu  
   ||||||| ||| | |||||||    ||| g
   CAUUUGU GGA G GGGUCgg    cga  
UUU       C   A A       -aga   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-30e-5p

• Accession: MIMAT0032611
• Description: Salmo salar ssa-miR-30e-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-30e-3p

• Accession: MIMAT0032612
• Description: Salmo salar ssa-miR-30e-3p mature miRNA
• Sequence: 41 - CUGGGAGAAGGCUGUUUACUUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482