Stem-loop ssa-mir-33a-1

Accession

MI0026690

Description

Salmo salar ssa-mir-33a-1 precursor miRNA

Sequence

GUGCAUUGUAGUUGCAUUGCAcugggcugcaggaucaugCAAUGUGUCUGCAGUGCAGUA
.((((((((((..(((((((((((.....))).....))))))))..))))))))))...

Structure

--G          UU        -----   g 
   UGCAUUGUAG  GCAUUGCA     cug g
   ||||||||||  ||||||||     ||| c
   ACGUGACGUC  UGUAACgu     gac u
AUG          UG        acuag   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-33a-5p

• Accession: MIMAT0032618
• Description: Salmo salar ssa-miR-33a-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-33a-3p

• Accession: MIMAT0032619
• Description: Salmo salar ssa-miR-33a-3p mature miRNA
• Sequence: 40 - CAAUGUGUCUGCAGUGCAGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482