Stem-loop ssa-mir-365-1

Accession

MI0026693

Description

Salmo salar ssa-mir-365-1 precursor miRNA

Sequence

65016 reads, 226.0 reads per million, 87 experiments

AGGGACUUUUAGGGGCAGCUGUGuuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAU
(((((.(((((((((((((((.(((.....))).)))).....))))))))))).)))))..

Structure

--     C           -----    U   u 
  AGGGA UUUUAGGGGCA     GCUG Guu u
  ||||| |||||||||||     |||| ||| a
  UUCCU AAAAUCCCCGU     ugac caa u
UA     A           AAUac    c   u 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-365-5p

• Accession: MIMAT0032622
• Description: Salmo salar ssa-miR-365-5p mature miRNA
• Sequence: 1 - AGGGACUUUUAGGGGCAGCUGUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-365-3p

• Accession: MIMAT0032623
• Description: Salmo salar ssa-miR-365-3p mature miRNA
• Sequence: 41 - UAAUGCCCCUAAAAAUCCUUAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482