Stem-loop ssa-mir-429

Accession

MI0026698

Description

Salmo salar ssa-mir-429 precursor miRNA

Literature search

1 open access papers mention ssa-mir-429
(1 sentences)

Sequence

GUCUUACCAGACAUGGUUAGaucuaauuaucccugucUAAUACUGUCUGGUAAUGCCG
((.((((((((((..(((((((............)))))))..)))))))))).))..

Structure

--  C          UG       cuaau 
  GU UUACCAGACA  GUUAGau     u
  || ||||||||||  |||||||      
  CG AAUGGUCUGU  UAAUcug     a
GC  U          CA       ucccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-429-5p

• Accession: MIMAT0032629
• Description: Salmo salar ssa-miR-429-5p mature miRNA
• Sequence: 1 - GUCUUACCAGACAUGGUUAG - 20
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-429-3p

• Accession: MIMAT0032630
• Description: Salmo salar ssa-miR-429-3p mature miRNA
• Sequence: 38 - UAAUACUGUCUGGUAAUGCCG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482