Stem-loop ssa-mir-430c

Accession

MI0026701

Description

Salmo salar ssa-mir-430c precursor miRNA

Literature search

1 open access papers mention ssa-mir-430c
(1 sentences)

Sequence

AACCCUAACAAAAGCAUUGACUgguuuuguuugcagUAAGUGCUUUUUGUUUGGGUAG
.((((.((((((((((((.((((..........)))).))))).))))))).))))..

Structure

-A    U       -     G    guuu 
  ACCC AACAAAA GCAUU ACUg    u
  |||| ||||||| ||||| ||||     
  UGGG UUGUUUU CGUGA Ugac    g
GA    U       U     A    guuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-430c-5p

• Accession: MIMAT0032635
• Description: Salmo salar ssa-miR-430c-5p mature miRNA
• Sequence: 1 - AACCCUAACAAAAGCAUUGACU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-430c-3p

• Accession: MIMAT0032636
• Description: Salmo salar ssa-miR-430c-3p mature miRNA
• Sequence: 37 - UAAGUGCUUUUUGUUUGGGUAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482