Stem-loop ssa-mir-449a

Accession

MI0026702

Description

Salmo salar ssa-mir-449a precursor miRNA

Sequence

AGGCAGUGUAACGUUAGCUGACuguuuucucauuugUCAGCUCACGCUACAGUUGCUCC
.(((((((((.(((.(((((((.............))))))).))).)))).)))))..

Structure

-A     -    A   U       uguuu 
  GGCAG UGUA CGU AGCUGAC     u
  ||||| |||| ||| |||||||     c
  UCGUU ACAU GCA UCGACUg     u
CC     G    C   C       uuuac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-449a-5p

• Accession: MIMAT0032637
• Description: Salmo salar ssa-miR-449a-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAACGUUAGCUGAC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-449a-3p

• Accession: MIMAT0032638
• Description: Salmo salar ssa-miR-449a-3p mature miRNA
• Sequence: 37 - UCAGCUCACGCUACAGUUGCUCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482