Stem-loop ssa-mir-449b

Accession

MI0026703

Description

Salmo salar ssa-mir-449b precursor miRNA

Sequence

AGGCAGUGUCUUGUUAGCUGAauggucuguuuuaucAGUUUACCUGUUGCUGCCCUC
.((((((..(..((.((((((.(((......))))))))).))..)..))))))...

Structure

--A      GU UU  U      a   uc 
   GGCAGU  C  GU AGCUGA ugg  u
   ||||||  |  || |||||| |||   
   CCGUCG  G  CA UUGAcu auu  g
CUC      UU UC  U      -   uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-449b-5p

• Accession: MIMAT0032639
• Description: Salmo salar ssa-miR-449b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUCUUGUUAGCUGA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-449b-3p

• Accession: MIMAT0032640
• Description: Salmo salar ssa-miR-449b-3p mature miRNA
• Sequence: 37 - AGUUUACCUGUUGCUGCCCUC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482