Stem-loop ssa-mir-458

Accession

MI0026708

Description

Salmo salar ssa-mir-458 precursor miRNA

Sequence

AGCGCCAUUUACAGAGCUAUAAgcaugaugguugucAUAGCUCUUUGAAUGGUACUGC
((.((((((((.((((((((..(((.......))).)))))))).)))))))).))..

Structure

--  C        C        AA   ug 
  AG GCCAUUUA AGAGCUAU  gca  a
  || |||||||| ||||||||  |||  u
  UC UGGUAAGU UCUCGAUA  ugu  g
CG  A        U        -c   ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-458-5p

• Accession: MIMAT0032647
• Description: Salmo salar ssa-miR-458-5p mature miRNA
• Sequence: 1 - AGCGCCAUUUACAGAGCUAUAA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-458-3p

• Accession: MIMAT0032648
• Description: Salmo salar ssa-miR-458-3p mature miRNA
• Sequence: 37 - AUAGCUCUUUGAAUGGUACUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482