Stem-loop ssa-mir-722-1

Accession

MI0026722

Description

Salmo salar ssa-mir-722-1 precursor miRNA

Sequence

63404 reads, 700.0 reads per million, 87 experiments

aUUUGAAACGUUUUAGCCAAAAAuguuuccacaguaaagguguuuUUUGCAGAAACGUUUCAGAUUU
((((((((((((((.((.(((((((...((........))))))))).)).))))))))))))))..

Structure

--              A  C       uuu  aca 
  aUUUGAAACGUUUU GC AAAAAug   cc   g
  |||||||||||||| || |||||||   ||    
  UAGACUUUGCAAAG CG UUuuugu   gg   u
UU              A  U       ---  aaa 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-722-5p

• Accession: MIMAT0032667
• Description: Salmo salar ssa-miR-722-5p mature miRNA
• Sequence: 2 - UUUGAAACGUUUUAGCCAAAAA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-722-3p

• Accession: MIMAT0032668
• Description: Salmo salar ssa-miR-722-3p mature miRNA
• Sequence: 46 - UUUGCAGAAACGUUUCAGAUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482