Stem-loop ssa-mir-727-1

Accession

MI0026732

Description

Salmo salar ssa-mir-727-1 precursor miRNA

Sequence

UCAGUCUUCAAUUCCUCCCAGCccguuacuauggaaacugugaGUUGAGGCGAGUUGAAGACU
..(((((((((((((((.(((.((((....))))...))).))).......))))))))))))

Structure

UC            -------   C   --C    u 
  AGUCUUCAAUUC       CUC CAG   ccgu a
  ||||||||||||       ||| |||   ||||  
  UCAGAAGUUGAG       Gag guc   ggua c
--            CGGAGUU   u   aaa    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-727-5p

• Accession: MIMAT0032675
• Description: Salmo salar ssa-miR-727-5p mature miRNA
• Sequence: 1 - UCAGUCUUCAAUUCCUCCCAGC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-727-3p

• Accession: MIMAT0032676
• Description: Salmo salar ssa-miR-727-3p mature miRNA
• Sequence: 44 - GUUGAGGCGAGUUGAAGACU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482