Stem-loop ssa-mir-729

Accession

MI0026734

Description

Salmo salar ssa-mir-729 precursor miRNA

Sequence

CAGGGUUGUAUCAUAACCAACCuguaugguuuagaagUAUGGGUAUGAUACGACCUG
..(((((((((((((.((((((.....))).........))).))))))))))))).

Structure

CA             A   ---------   u 
  GGGUUGUAUCAUA CCA         ACC g
  ||||||||||||| |||         ||| u
  UCCAGCAUAGUAU GGU         ugg a
-G             G   AUgaagauu   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-729-5p

• Accession: MIMAT0032677
• Description: Salmo salar ssa-miR-729-5p mature miRNA
• Sequence: 1 - CAGGGUUGUAUCAUAACCAACC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-729-3p

• Accession: MIMAT0032678
• Description: Salmo salar ssa-miR-729-3p mature miRNA
• Sequence: 38 - UAUGGGUAUGAUACGACCUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482